Bustin SA (2004) A-Z of quantitative PCR. International University Line, La Jolla.
Nolan T, Hands RE, Bustin SA (2006). Quantification of mRNA using real-time RT-PCR, Nat Protoc, 1:1559-1582
Shipley, G.L. (2005) Real-Time Quantitative PCR: Theory and Practice. In Encyclopedia of molecular cell biology and molecular medicine (R. A. Meyers, Ed.), Vol. 11, pp. 481-523. Wiley-VCH Verlag, Weinheim.
Shipley, G.L. (2006) Chapter 1: An Introduction to Real-Time PCR. In Real-Time PCR (Dorak MT (Ed), New York, Taylor & Francis Group.
Stephen A Bustin, Vladimir Benes, Jeremy A Garson, Jan Hellemans, Jim Huggett, Mikael Kubista, Reinhold Mueller, Tania Nolan, Michael W Pfaffl, Gregory L Shipley, Jo Vandesompele, and Carl T Wittwer (2009).The MIQE Guidelines: Minimum Information for Publication of Quantitative Real-Time PCR, Clinical Chemistry, 55, 609-620.
Vadesompele, J, De Preter, K, Pattyn, F, Van Roy, N, De Paepe, A, Speleman, F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol, 3(7):RESEARCH0034. Epub 2002, Jun 18.
Mestdagh, P, Van Vlierberghe, P, De Weer, A, Muth, D, Westermann, F, Speleman, F and Vandesompele, J. A novel and universal method for microRNA RT-qPCR data normalization. Genome Biol. 10(6):R64. Epub 2009 Jun 16.
Proteins
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Gowan, S.M., et al. (2007) Application of Meso Scale Technology for the Measurement of Phosphoproteins in Human Tumor Xenografts. Assay and Drug Dev Technol. 5 (3):391-401.
Chen, J.H., Zhang, Z.M. Stebbins J.L., Zhang, X.Y., Hoffman, R., Moore, A., Pellecchia, M. (2007) A Fragment-Based Approach for the Discovery of Isoform-Specific p38 Inhibitors. ACS Chem Bio. (2(5):329-336.
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The following web site updated regularly by Michael Pfaffl in Freising-Weinstephan, Germany has many useful links for all things related to real-time qPCR http://www.gene-quantification.info/